PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P28060_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 306aa    MW: 34244.6 Da    PI: 8.1437
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P28060_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-10138186355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++iN+++  L+ l+P +    sk   Ka +L + ++Y++sLq
  GSMUA_Achr9P28060_001 138 SNHSLAERVRREKINERMKLLQGLVPGC----SKVTGKAVMLDEIINYVQSLQ 186
                            58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.11E-18133202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.60E-10134190No hitNo description
PROSITE profilePS5088815.923135185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-17137202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-7138186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-11141191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MMNPFDATTS RDNSGAQMQK KNKIDMMEAV RISSLSTDYV SKNGSLMKEQ KDMHHQPNRT  60
GVHQEDPSNL ATAAGNSSSS TTRRRANEIP MEMEEDHEPK SERKSLTVAT VNPKRKQVKD  120
ITESDLVHVR ARHGQATSNH SLAERVRREK INERMKLLQG LVPGCSKVTG KAVMLDEIIN  180
YVQSLQQQVE FLSMKLAAIN PRLDIDREGV LPKYLLQPCN SPSAAAGFSS DIIHPQLHLP  240
HQGLIQSALS GPRNPPDLLG RSIDTQMTAE DGYNMQVSNA WDEELHNVVQ MRCSSSTNLY  300
THRIQQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009419224.10.0PREDICTED: transcription factor bHLH49-like
RefseqXP_009419225.10.0PREDICTED: transcription factor bHLH49-like
RefseqXP_009419226.10.0PREDICTED: transcription factor bHLH49-like
RefseqXP_009419227.10.0PREDICTED: transcription factor bHLH49-like
SwissprotQ9CAA97e-52BH049_ARATH; Transcription factor bHLH49
TrEMBLM0U4630.0M0U463_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P28060_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29093785
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.39e-53bHLH family protein